Stanford hiv genotype database
WebbART-AiDE makes it possible to generate a permanent electronic and graphical record of a patient's antiretroviral treatment (ARV) history, plasma HIV-1 RNA levels, CD4 counts, and (when available) genotypic resistance data. Submitted data can be reviewed and the underlying XML file can be saved on the Graphical Summary page.
Stanford hiv genotype database
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WebbA curated database containing nearly all published HIV RT and protease sequences: a resource designed for researchers studying evolutionary and drug-related variation in the … WebbThe Stanford University HIV-1 Drug Resistance Database detects mutations known to confer resistance to antiretroviral therapies. Mutations are scored and these scores are converted to provide qualitative results estimating susceptibility to medications.
WebbMicrobiologist with six years of experience in BSL 2 & 3 lab settings. Experience of working on infectious diseases like HBV, HCV, HIV, Dengue, Rabies, Influenza virus and SARS-CoV-2 plus research experience of working on Uropathogens. Well-versed in the areas of Bacteriology, Virology and Molecular Biology as well as in defining accuracy, precision … Webb7 dec. 2024 · Clinical outcome data comprising genotype, treatments, plasma HIV-1 RNA levels and CD4 counts from 15 clinical trials and >1500 Treatment-Change Episodes … Genotype-Rx - HIV Drug Resistance Database - Stanford University Drug susceptibility results (fold-decreased susceptibility) of viruses containing one … Genotype-Clinical - HIV Drug Resistance Database - Stanford University HIVDB Program - HIV Drug Resistance Database - Stanford University The Stanford HIV Drug Resistance Database (HIVDB) ... from published … Support the School of Medicine, Stanford Healthcare, and Cancer Institute. Skip to … Single Genome Sequence Database - HIV Drug Resistance Database - Stanford … Transmitted Resistance Surveillance Map Published Virus Sequences From …
WebbA curated database containing nearly all published HIV RT and protease sequences: a resource designed for researchers studying evolutionary and drug-related variation in the … Webb30 sep. 2024 · RECall, MEGA X and the Stanford HIV database) ... Materials and methods: Results of HIV-1 genotypic drug resistance assay was evaluated by comparing an inhouse method to a commercial test.
Webb29 sep. 2024 · Laboratory methods Using 1000 copies/ml program guidelines cut off for viral suppression as the test kit sensitivity limit, we picked remnant samples from the HIV RNA measurement section after HIV-1 viral load testing. 21 We performed HIV genotypic resistance testing on 135 remnant patient samples. We did plasma virus extraction …
Webb9 sep. 2006 · Such genotype-treatment, genotype-phenotype, and genotype-outcome correlations are contained in the Stanford HIV RT and Protease Sequence Database and have specific usefulness. Publicly available databases have revolutionized how biological research is done and have led to an exponential increase in discovery brought on … naughty nice coffee mugsWebb17 juni 2024 · Based on the Stanford Genotypic Resistance Interpretation Algorithm major or non-accessory NRTI drug resistance was observed in 6 (3.8%) sequences, PI or NNRTI resistance in one (0.6%) case each ... marjorie house shelterWebbmutations using the curated Stanford University HIV-1 Drug Resistance Database (Soo-Yon R. et. al., 2003) and the REGA HIV-1 subtyping tool to determine the subtype (de Oliveira T. et. al. 2005 and Alcantara LCJ. et. al. 2009). The Stanford University HIV-1 Drug Resistance Database detects mutations known to confer resistance to antiretroviral ... naughty nice christmas t shirtsWebb11 nov. 2024 · Filtered genotype-phenotype data on the Stanford HIV drug resistance database was retrieved for PIs (Das & Arnold, 2013). We have organized this dataset with respect to isolates and inhibitors, and 498 protease mutations have been observed. naughty nice christmas shirtsWebb29 jan. 2024 · RECall, MEGA X and the Stanford HIV database) against the standard method (RECall and Stanford database). Exatype is a web-based HIV Drug resistance bioinformatic pipeline available at sanger.exatype.com . To validate the exatype, we used a test set of 135 remnant HIV viral load samples at the National HIV Reference Laboratory … naughty nice flannel rhymeWebb30 juni 2009 · Although HIV resistance databases make efforts to incorporate newer genotypic data ... HIV resistance databases continue to enter HIV genotype data from non-B subtype variants. So far, however, very few datasets, such as the Stanford HIV resistance database and that of the ANRS, provide information for drugs that have become ... marjorie howell obituaryWebb24 jan. 2012 · The Stanford HIV Drug Resistance Database hosts a freely available online genotypic resistance interpretation system called HIVdb to help clinicians and laboratories interpret HIV-1... naughty nice flip sequin hat